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LOVD - Variant listings for MSH6

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Patient data (#0000283)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity No known pathogenicity
Concluded pathogenicity No known pathogenicity
Exon 4
DNA change c.2633T>C   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(Val878Ala)
MAPP/PP2 Prior P 0.004
Prior P 0.100
IARC Classification Class 1: Not pathogenic
InSiGHT Classification Class 1: Not pathogenic
Tumour Char LR 1.60E-06
Segregation LR 0.188
Odds for causality 3.00E-07
Posterior P 3.33E-08
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID MSH6_00026

1 entry in MSH6

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
-/- Unknown 4 c.2633T>C r.(?) p.(Val878Ala) 0.004 0.100 Class 1: Not pathogenic Class 1: Not pathogenic 1.60E-06 0.188 3.00E-07 3.33E-08 Thompson et al., 2014, InSiGHT - DNA SEQ MSH6_00026