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LOVD - Variant listings for MSH2

About this overview [Show]

Patient data (#0000203)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity Probably pathogenic
Concluded pathogenicity Probably pathogenic
Exon 13
DNA change c.2021G>A   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(Gly674Asp)
MAPP/PP2 Prior P 0.960
Prior P 0.900
IARC Classification Class 4: Likely pathogenic
InSiGHT Classification Class 4: Likely pathogenic
Tumour Char LR -
Segregation LR 3.700
Odds for causality 3.700
Posterior P 0.9708
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ

1 entry in MSH2

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
+?/+? Unknown 13 c.2021G>A r.(?) p.(Gly674Asp) 0.960 0.900 Class 4: Likely pathogenic Class 4: Likely pathogenic - 3.700 3.700 0.9708 Thompson et al., 2014, InSiGHT - DNA SEQ