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LOVD - Variant listings for MSH6

About this overview [Show]

Patient data (#0000269)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity Probably no pathogenicity
Concluded pathogenicity Probably no pathogenicity
Exon 4
DNA change c.1667A>T   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(Tyr556Phe)
MAPP/PP2 Prior P 0.007
Prior P 0.100
IARC Classification Class 2: Likely not pathogenic
InSiGHT Classification Class 2: Likely not pathogenic
Tumour Char LR -
Segregation LR 0.267
Odds for causality 0.267
Posterior P 0.0288
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID MSH6_00012

1 entry in MSH6

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
-?/-? Unknown 4 c.1667A>T r.(?) p.(Tyr556Phe) 0.007 0.100 Class 2: Likely not pathogenic Class 2: Likely not pathogenic - 0.267 0.267 0.0288 Thompson et al., 2014, InSiGHT - DNA SEQ MSH6_00012