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LOVD - Variant listings for MSH6

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Patient data (#0000275)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity Probably pathogenic
Concluded pathogenicity Probably pathogenic
Exon 4
DNA change c.2117T>C   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(Phe706Ser)
MAPP/PP2 Prior P 0.815
Prior P 0.815
IARC Classification Class 4: Likely pathogenic
InSiGHT Classification Class 4: Likely pathogenic
Tumour Char LR 8.660
Segregation LR 1.930
Odds for causality 16.713
Posterior P 0.9866
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID MSH6_00018

1 entry in MSH6

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
+?/+? Unknown 4 c.2117T>C r.(?) p.(Phe706Ser) 0.815 0.815 Class 4: Likely pathogenic Class 4: Likely pathogenic 8.660 1.930 16.713 0.9866 Thompson et al., 2014, InSiGHT - DNA SEQ MSH6_00018