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LOVD - Variant listings for MSH6

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Patient data (#0000288)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity Probably no pathogenicity
Concluded pathogenicity Probably no pathogenicity
Exon 5
DNA change c.3246G>T   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(=)
MAPP/PP2 Prior P -
Prior P 0.100
IARC Classification Class 2: Likely not pathogenic
InSiGHT Classification Class 2: Likely not pathogenic
Tumour Char LR 0.040
Segregation LR -
Odds for causality 0.040
Posterior P 0.0044
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID MSH6_00031

1 entry in MSH6

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
-?/-? Unknown 5 c.3246G>T r.(?) p.(=) - 0.100 Class 2: Likely not pathogenic Class 2: Likely not pathogenic 0.040 - 0.040 0.0044 Thompson et al., 2014, InSiGHT - DNA SEQ MSH6_00031