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LOVD - Variant listings for MSH6

About this overview [Show]

Patient data (#0000289)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity No known pathogenicity
Concluded pathogenicity No known pathogenicity
Exon 5i
DNA change c.3439-16C>T   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(=)
MAPP/PP2 Prior P -
Prior P 0.260
IARC Classification Class 1: Not pathogenic
InSiGHT Classification Class 1: Not pathogenic
Tumour Char LR 1.00E-04
Segregation LR 0.640
Odds for causality 6.40E-05
Posterior P 2.25E-05
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID MSH6_00032

1 entry in MSH6

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
-/- Unknown 5i c.3439-16C>T r.(?) p.(=) - 0.260 Class 1: Not pathogenic Class 1: Not pathogenic 1.00E-04 0.640 6.40E-05 2.25E-05 Thompson et al., 2014, InSiGHT - DNA SEQ MSH6_00032