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LOVD - Variant listings for MSH6

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Patient data (#0000295)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity Probably pathogenic
Concluded pathogenicity Probably pathogenic
Exon 8
DNA change c.3724_3726del   (View in UCSC Genome Browser)
RNA change r.(?)
Protein p.(Arg1242del)
MAPP/PP2 Prior P 0.900
Prior P 0.900
IARC Classification Class 4: Likely pathogenic
InSiGHT Classification Class 4: Likely pathogenic
Tumour Char LR -
Segregation LR 2.619
Odds for causality 2.619
Posterior P 0.9593
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID MSH6_00038

1 entry in MSH6

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
+?/+? Unknown 8 c.3724_3726del r.(?) p.(Arg1242del) 0.900 0.900 Class 4: Likely pathogenic Class 4: Likely pathogenic - 2.619 2.619 0.9593 Thompson et al., 2014, InSiGHT - DNA SEQ MSH6_00038