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LOVD - Variant listings for PMS2

About this overview [Show]

Patient data (#0000312)
Disease -
Reference -
Remarks -

Variant data
Allele Unknown
Reported pathogenicity Probably pathogenic
Concluded pathogenicity Probably pathogenic
Exon 10i
DNA change c.1144+2T>A   (View in UCSC Genome Browser)
RNA change r.989_1144del
Protein p.(Glu330_Glu381del)
MAPP/PP2 Prior P -
Prior P 0.960
IARC Classification Class 4: Likely pathogenic
InSiGHT Classification Class 4: Likely pathogenic
Tumour Char LR -
Segregation LR 2.777
Odds for causality 2.777
Posterior P 0.9852
Reference Thompson et al., 2014, InSiGHT
Variant remarks -
Template DNA
Technique SEQ
DB-ID PMS2_00008

1 entry in PMS2

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
RNA change Descending
Ascending
Protein Descending
Ascending
MAPP/PP2 Prior P Descending
Ascending
Prior P Descending
Ascending
IARC Classification Descending
Ascending
InSiGHT Classification Descending
Ascending
Tumour Char LR Descending
Ascending
Segregation LR Descending
Ascending
Odds for causality Descending
Ascending
Posterior P Descending
Ascending
Reference Descending
Ascending
Variant remarks Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
DB-ID Descending
Ascending
+?/+? Unknown 10i c.1144+2T>A r.989_1144del p.(Glu330_Glu381del) - 0.960 Class 4: Likely pathogenic Class 4: Likely pathogenic - 2.777 2.777 0.9852 Thompson et al., 2014, InSiGHT - DNA SEQ PMS2_00008